BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025B01SP1|AL428324
(885 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1752 1738 0.0
>3x_Contig1752
Length = 22471
Score = 1738 bits (875), Expect = 0.0
Identities = 881/885 (99%)
Strand = Plus / Plus
Query: 1 gatccaatccttgattttcttcaagaatttgttttcttgcaaaagataatctttgggagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13681 gatccaatccttgattttcttcaagaatttgttttcttgcaaaagataatctttgggagc 13740
Query: 61 racgttaagtagaaccagggttggtttagctgttagaaagttgtgtttattcaggatttt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13741 aacgttaagtagaaccagggttggtttagctgttagaaagttgtgtttattcaggatttt 13800
Query: 121 ratctcttcctctgtccagttctgcttgaagtgtgacaattttcttccctcgtacatatg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13801 aatctcttcctctgtccagttctgcttgaagtgtgacaattttcttccctcgtacatatg 13860
Query: 181 ggcctctaattcctctagcaatctcagttcaagatgcatttctaagaattctggagagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13861 ggcctctaattcctctagcaatctcagttcaagatgcatttctaagaattctggagagtt 13920
Query: 241 tttcggagatctgtttatctttttgttaattctttctcttgcaccttccagccattcgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13921 tttcggagatctgtttatctttttgttaattctttctcttgcaccttccagccattcgag 13980
Query: 301 atctttcagcaccagttcatcttgcactaatgacaagtctctaactggatccacatttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13981 atctttcagcaccagttcatcttgcactaatgacaagtctctaactggatccacatttcc 14040
Query: 361 ttcaatatgagtgatttcatcattttcaaatcctcgaaccacttggtatattccgtctac 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14041 ttcaatatgagtaatttcatcattttcaaatcctcgaaccacttggtatattccgtctac 14100
Query: 421 gtgccgaatatcattaaggaacttgtttcccaaaccttccccacttgatgctcctcttgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14101 gtgccgaatatcattaaggaacttgtttcccaaaccttccccacttgatgctcctcttgt 14160
Query: 481 taatccagcaatatcgaaaatggaaagtgtagctggaattttcttctgactctcatagag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14161 taatccagcaatatcgaaaatggaaagtgtagctggaattttcttctgactctcatagag 14220
Query: 541 tttatgaagatggtccaatttaaagctgggtacaataaccttggactcttcgggttctat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14221 tttatgaagatggtccaatttaaagctgggtacaataaccttggactcttcgggttctat 14280
Query: 601 agtggcaaaagggtagttagctggattacccaatttcgacttggttattgcctggraaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 14281 agtggcaaaagggtagttagctggattacccaatttcgacttggttattgcctggaaaaa 14340
Query: 661 cgttgatttacctacattggccaatccaacgatgcctgaagctagattatttgaaggtcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14341 cgttgatttacctacattggccaatccaacgatgcctgaagctagattatttgaaggtcg 14400
Query: 721 tcccagtacggtataaaaccgttttatagattggtgaattagatgcatgtatgttggcac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14401 tcccagtacggtataaaaccgttttatagattggtgaattagatgcatgtatgttggcac 14460
Query: 781 aaggcaataccttgcattgaggtcagttgattgaaatttaagtattatgaactatttcaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14461 aaggcaataccttgcattgaggtcagttgattgaaatttaagtattatgaactatttcaa 14520
Query: 841 gatttgattactcaatgtatcttatattgacagaatctgaaaaaa 885
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14521 gatttgattactcaatgtatcttatattgacagaatctgaaaaaa 14565
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7297
Number of Sequences: 1807
Number of extensions: 7297
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 885
length of database: 10,358,551
effective HSP length: 16
effective length of query: 869
effective length of database: 10,329,639
effective search space: 8976456291
effective search space used: 8976456291
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)